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SRX7658480: WXS MCF7_pabloR
1 ILLUMINA (Illumina NovaSeq 6000) run: 44.3M spots, 8.9G bases, 4.2Gb downloads

Design: DNA was extracted from the target cell lines using QIAamp DNA mini kit, according to the manufacturers instructions (Qiagen). Exome libraries were generated, as previously described in Martin et al. Nat Commun 2017; 8: 186 using SureSelectXT Human All Exon v5 (Agilent, cat # 5190-6210).
Submitted by: Institute of Cancer Research
Study: Tumour kinome re-wiring governs resistance to palbociclib in estrogen receptor positive breast cancers
show Abstracthide Abstract
Combination of CDK4/6 inhibitors and endocrine therapy improves clinical outcomein advanced estrogen receptor (ER)-positive breast cancer, however relapse isinevitable. Human breast cancer cell lines that have undergone long term estrogen deprivation were cultured in 1uM palbociclib until resistance developed. Exome sequencing was undertaken to identify mutations and copy number alterations associated with resistance.
Sample: MCF7 palbociclib resistant whole exome sequence
SAMN13958428 • SRS6087357 • All experiments • All runs
Organism: Homo sapiens
Library:
Name: MCF7_pabloR
Instrument: Illumina NovaSeq 6000
Strategy: WXS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 44.3M spots, 8.9G bases, 4.2Gb
Run# of Spots# of BasesSizePublished
SRR1099740744,320,6468.9G4.2Gb2020-05-12

ID:
9992678

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